Filipe Matias

Filipe Matias

@filipematias23

Phenomics and Enviromics Lead at Syngenta Seeds LATAM. Interests in quantitative genetics, genomic selection, GWAS, HTP, remote sensing, image analysis, and R.

Syngenta Seeds LATAM Uberlandia, MG, Brazil
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Language Breakdown

Lines of code distribution across 28 owned repositories

1.1M Total LOC
R
561,403 lines
52.0%
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Roff
511,791 lines
47.4%
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Dockerfile
6,571 lines
0.6%
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558 lines
0.1%
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T

T-Shaped Developer

T-shaped

Deep in R with broad versatility

R
Roff
Dockerfile
Shell

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Filipe Matias
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44

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Coding Streak

Contribution activity over the past year

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Top Repositories

cleanRfield

cleanRfield: This package is a compilation of functions to clean and filter observations from yield monitors or other agricultural spatial point data. Yield monitors are prone to error, and filtering the observations or removing observations from near field boundaries can improve estimates of whole-field yield, combine speed, grain moisture, or other parameters. In this package, users can easily select filters thresholding for one or more traits and prepare a smaller dataset to make decisions.

42 3
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Bison-Fly

Bison-Fly is the NDSU Spring Wheat UAV Pipeline developed in partnership with Drone2Phenome UAV community (D2P). In this pipeline we are presenting step by step how we have been applying UAV data on our breeding program. This is a open source R code from where anyone can use and adept for different crops. All suggestions are welcome. Help us to build this platform in partnership with Drone2Phenome community.

32 5
Bison-Fly_Workshop_01

In this workshop, I present step-by-step how we leverage UAV data in our breeding program. This is open source R code that anyone may use and adopt for different crops and situations. The Bison-Fly tutorial is the NDSU Spring Wheat UAV Pipeline developed in partnership with Drone2Phenome (D2P). We hope this pipeline helps you with your research, and all suggestions to improve it are welcome.

8 1
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Be-Breeder

Be-Breeder 2.0 provides a series of functions and tools for phenotypic and molecular analyses to simulate and compare a wide range of breeding scenarios.

7 1
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FIELDimageR-Workshop-9

Workshop presented for GEMS-UFSSER. In this course, I went through the basic steps of FIELDimageR pipeline showing how to evaluate and apply remote sensing data and lab images in plant breeding.

6 0
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FIELDimageR-Workshop-11

Workshop presented for NDSU Breeding Pipeline Database Managers. In this course, I went through the basic steps of the FIELDimageR pipeline showing how to evaluate and apply remote sensing data in plant breeding.

5 3
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FIELDimageR-QGIS-Workshop

In this workshop, we went through the basic steps of FIELDimageR-QGIS and FIELDimageR.Extra pipeline showing how to evaluate and apply remote sensing data on plant breeding experiments.

4 1
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FIELDimageR-Workshop-10

Workshop presented for NAPB. In this course, I went through the basic steps of the FIELDimageR pipeline showing how to evaluate and apply remote sensing data in plant breeding.

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FIELDimageR-Workshop-Examples
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Phenomics-2026
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Open Source Impact

Contributions to external projects

1 merged PRs
Contributed to 1 repositories